diff --git a/api/internal/target/kusttarget.go b/api/internal/target/kusttarget.go
index 64fac33f5..2330e1429 100644
--- a/api/internal/target/kusttarget.go
+++ b/api/internal/target/kusttarget.go
@@ -127,13 +127,11 @@ func (kt *KustTarget) MakeCustomizedResMap() (resmap.ResMap, error) {
 }
 
 func (kt *KustTarget) makeCustomizedResMap() (resmap.ResMap, error) {
-	// Only track origin if we have Helm charts or build metadata is requested
-	// This optimization avoids unnecessary overhead when origins aren't needed
-	var origin *resource.Origin
-	if len(kt.kustomization.BuildMetadata) != 0 || len(kt.kustomization.HelmCharts) > 0 {
-		origin = &resource.Origin{}
-	}
-	kt.origin = origin
+	// Track origin for all resources so builtins can make decisions
+	// based on where resources originated from.
+	// Origin annotations will be stripped from the output if not
+	// requested via build metadata options.
+	kt.origin = &resource.Origin{}
 	ra, err := kt.AccumulateTarget()
 	if err != nil {
 		return nil, err